Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 AC012508.2-201ENST00000567613 1472 ntBASIC17.92■□□□□ 0.46
DDX11Q96FC9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DDX11Q96FC9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX11Q96FC9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 AC092933.1-201ENST00000393644 945 ntBASIC17.91■□□□□ 0.46
DDX11Q96FC9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 FAM21FP-201ENST00000426241 1131 ntBASIC17.91■□□□□ 0.46
DDX11Q96FC9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 AC016694.1-201ENST00000434179 700 ntBASIC17.91■□□□□ 0.46
DDX11Q96FC9 ACTBP11-201ENST00000436287 1126 ntBASIC17.91■□□□□ 0.46
DDX11Q96FC9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 FO681548.1-201ENST00000455617 1132 ntBASIC17.91■□□□□ 0.46
DDX11Q96FC9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 MIR4525-201ENST00000580000 75 ntBASIC17.91■□□□□ 0.46
DDX11Q96FC9 MIR4538-201ENST00000581377 78 ntBASIC17.91■□□□□ 0.46
DDX11Q96FC9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 AC005252.2-201ENST00000624630 1141 ntBASIC17.91■□□□□ 0.46
DDX11Q96FC9 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
DDX11Q96FC9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX11Q96FC9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 FAM45BP-202ENST00000592932 1624 ntBASIC17.9■□□□□ 0.46
DDX11Q96FC9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 AL157414.3-201ENST00000624276 1954 ntBASIC17.9■□□□□ 0.46
DDX11Q96FC9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 AC104457.1-201ENST00000401024 814 ntBASIC17.9■□□□□ 0.46
DDX11Q96FC9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 FTH1P14-201ENST00000482930 551 ntBASIC17.9■□□□□ 0.46
DDX11Q96FC9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 FAM8A2P-201ENST00000528813 1142 ntBASIC17.9■□□□□ 0.46
DDX11Q96FC9 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX11Q96FC9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX11Q96FC9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms