Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TTC28Q96AY4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC28Q96AY4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC28Q96AY4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TTC28Q96AY4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC28Q96AY4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TTC28Q96AY4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TTC28Q96AY4 SHMT1P1-201ENST00000419974 1312 ntBASIC14.81□□□□□ -0.04
TTC28Q96AY4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.81□□□□□ -0.04
TTC28Q96AY4 RPL13AP3-202ENST00000494676 1473 ntBASIC14.81□□□□□ -0.04
TTC28Q96AY4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TTC28Q96AY4 U73169.1-201ENST00000395152 367 ntBASIC14.81□□□□□ -0.04
TTC28Q96AY4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.81□□□□□ -0.04
TTC28Q96AY4 CCNL2P1-201ENST00000512846 969 ntBASIC14.81□□□□□ -0.04
TTC28Q96AY4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.81□□□□□ -0.04
TTC28Q96AY4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 PPP1R2P10-201ENST00000393023 595 ntBASIC14.8□□□□□ -0.04
TTC28Q96AY4 AL157823.1-201ENST00000403727 628 ntBASIC14.8□□□□□ -0.04
TTC28Q96AY4 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.8□□□□□ -0.04
TTC28Q96AY4 RN7SL128P-201ENST00000467883 305 ntBASIC14.8□□□□□ -0.04
TTC28Q96AY4 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 AC087203.1-201ENST00000532111 1181 ntBASIC14.8□□□□□ -0.04
TTC28Q96AY4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 AP000244.1-201ENST00000424582 201 ntBASIC14.8□□□□□ -0.04
TTC28Q96AY4 RNU1-80P-201ENST00000459500 161 ntBASIC14.8□□□□□ -0.04
TTC28Q96AY4 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC14.8□□□□□ -0.04
TTC28Q96AY4 AC141586.5-201ENST00000624546 2050 ntBASIC14.8□□□□□ -0.04
TTC28Q96AY4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TTC28Q96AY4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 MIR193A-201ENST00000384882 88 ntBASIC14.79□□□□□ -0.04
TTC28Q96AY4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.79□□□□□ -0.04
TTC28Q96AY4 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 CA5BP1-205ENST00000435806 1064 ntBASIC14.79□□□□□ -0.04
TTC28Q96AY4 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 AL035414.1-201ENST00000451327 857 ntBASIC14.79□□□□□ -0.04
TTC28Q96AY4 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 PRR20FP-201ENST00000603320 180 ntBASIC14.79□□□□□ -0.04
TTC28Q96AY4 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 AC112504.1-201ENST00000623415 1841 ntBASIC14.79□□□□□ -0.04
TTC28Q96AY4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TTC28Q96AY4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TTC28Q96AY4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TTC28Q96AY4 SIRPB3P-201ENST00000340424 1216 ntBASIC14.78□□□□□ -0.04
TTC28Q96AY4 PSAT1P2-201ENST00000426107 972 ntBASIC14.78□□□□□ -0.04
TTC28Q96AY4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.78□□□□□ -0.04
TTC28Q96AY4 AC099328.1-201ENST00000498809 1030 ntBASIC14.78□□□□□ -0.04
TTC28Q96AY4 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC28Q96AY4 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC28Q96AY4 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC14.78□□□□□ -0.04
TTC28Q96AY4 SNORD3B-1-201ENST00000577988 758 ntBASIC14.78□□□□□ -0.04
TTC28Q96AY4 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC28Q96AY4 AC010335.3-201ENST00000623767 531 ntBASIC14.78□□□□□ -0.04
TTC28Q96AY4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TTC28Q96AY4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms