Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 CD8B2-202ENST00000417670 633 ntBASIC13.21□□□□□ -0.29
TMEM54Q969K7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 CNN2P8-201ENST00000421872 913 ntBASIC13.21□□□□□ -0.29
TMEM54Q969K7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 FAM197Y7-201ENST00000432892 766 ntBASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC007551.1-201ENST00000457394 519 ntBASIC13.21□□□□□ -0.29
TMEM54Q969K7 AL391280.1-201ENST00000506969 1062 ntBASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 AC244669.2-201ENST00000612320 853 ntBASIC13.21□□□□□ -0.29
TMEM54Q969K7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM54Q969K7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM54Q969K7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM54Q969K7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM54Q969K7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
TMEM54Q969K7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM54Q969K7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM54Q969K7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.21□□□□□ -0.3
TMEM54Q969K7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM54Q969K7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.21□□□□□ -0.3
TMEM54Q969K7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 AC092135.3-201ENST00000624151 1846 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 MRPL37P1-201ENST00000592451 1337 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 AC005912.2-201ENST00000619492 2400 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM54Q969K7 KRT43P-201ENST00000434019 910 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 AL590640.2-201ENST00000457038 527 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 GCOM2-201ENST00000509133 1104 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 AC022447.6-201ENST00000515522 438 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 KRT90P-201ENST00000549264 1064 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 AC106820.3-201ENST00000561653 397 ntBASIC13.2□□□□□ -0.3
TMEM54Q969K7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.2□□□□□ -0.3
TMEM54Q969K7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms