Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC019109.1-201ENST00000401725 1874 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 PRR13-208ENST00000549740 786 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 CALM3-206ENST00000594523 540 ntTSL 4 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC112702.1-201ENST00000623712 366 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 RN7SKP230-201ENST00000365642 335 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 HINT1-205ENST00000508488 703 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC005828.4-201ENST00000584608 552 ntTSL 4 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 RPSAP5-201ENST00000485258 884 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 IMPDH1P5-201ENST00000439688 1540 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 FTH1P19-201ENST00000402402 528 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 EEF1GP3-201ENST00000421044 1288 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AL132656.1-201ENST00000452173 490 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 RN7SL479P-201ENST00000472003 300 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC008446.1-201ENST00000522454 451 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 RHOJ-202ENST00000555125 548 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC008825.2-201ENST00000603374 718 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CEACAM22P-202ENST00000455058 1021 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 KF455155.1-201ENST00000604493 303 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC009779.7-201ENST00000609031 469 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 TRPM8-202ENST00000355722 904 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC096713.1-201ENST00000514650 978 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 PEBP1P1-201ENST00000554856 510 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AL359091.4-201ENST00000610052 409 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms