Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AC093813.1-201ENST00000605066 256 ntBASIC15.38■□□□□ 0.05
PTCD2Q8WV60 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AL009178.2-201ENST00000597278 2719 ntBASIC15.38■□□□□ 0.05
PTCD2Q8WV60 CICP14-201ENST00000629111 2732 ntBASIC15.38■□□□□ 0.05
PTCD2Q8WV60 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AC106881.1-201ENST00000605849 3329 ntBASIC15.38■□□□□ 0.05
PTCD2Q8WV60 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AP002414.2-201ENST00000591780 3365 ntBASIC15.37■□□□□ 0.05
PTCD2Q8WV60 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 NUS1P3-201ENST00000423502 862 ntBASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AC008735.3-201ENST00000596646 500 ntBASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AL034374.2-201ENST00000605281 548 ntBASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AC107373.2-201ENST00000607735 490 ntBASIC15.37■□□□□ 0.05
PTCD2Q8WV60 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.37■□□□□ 0.05
PTCD2Q8WV60 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 AL138799.1-201ENST00000448213 1675 ntBASIC15.37■□□□□ 0.05
PTCD2Q8WV60 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 MSTO2P-201ENST00000314835 1709 ntBASIC15.37■□□□□ 0.05
PTCD2Q8WV60 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.37■□□□□ 0.05
PTCD2Q8WV60 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.36■□□□□ 0.05
PTCD2Q8WV60 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 AC112492.5-201ENST00000421897 457 ntBASIC15.36■□□□□ 0.05
PTCD2Q8WV60 AC134915.1-201ENST00000426461 574 ntBASIC15.36■□□□□ 0.05
PTCD2Q8WV60 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
PTCD2Q8WV60 LINC01922-201ENST00000562582 719 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms