Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 MTHFR-210ENST00000641407 2387 ntBASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 DFFBP1-201ENST00000433250 979 ntBASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 UGT1A2P-201ENST00000454886 866 ntBASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 AC120045.2-201ENST00000567334 178 ntBASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 AC027796.2-201ENST00000575326 344 ntBASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 AL137783.1-201ENST00000623494 1896 ntBASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAF3IP1Q8TDR0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 PEG13-201ENST00000631594 5667 ntBASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 AC123567.1-201ENST00000548294 1261 ntBASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 AJ011932.1-201ENST00000621707 465 ntBASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRAF3IP1Q8TDR0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 AC140479.7-201ENST00000636301 2332 ntBASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAF3IP1Q8TDR0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms