Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 AC006158.1-201ENST00000610661 249 ntBASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CFAP43Q8NDM7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 R3HDM2P2-201ENST00000401880 2116 ntBASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 AL512306.1-201ENST00000432698 848 ntBASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 CR383656.3-201ENST00000551315 183 ntBASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 AL022334.2-201ENST00000610000 484 ntBASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 AC027601.3-201ENST00000622907 509 ntBASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 FES-204ENST00000414248 2327 ntTSL 2 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CFAP43Q8NDM7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 AL354861.1-201ENST00000445213 355 ntBASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 AC114947.1-202ENST00000514136 344 ntBASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 AC009145.4-201ENST00000625119 1294 ntBASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 AC009093.10-201ENST00000641956 1442 ntBASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 TCAF2P1-201ENST00000291129 2421 ntBASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 F10-203ENST00000409306 1450 ntTSL 3 BASIC22.85■■□□□ 1.25
CFAP43Q8NDM7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 BANF1P3-201ENST00000412556 261 ntBASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 ACTBP7-201ENST00000418351 1124 ntBASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 ST13P19-201ENST00000442505 1124 ntBASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 AP000911.2-201ENST00000534330 502 ntBASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 HNRNPA1P27-201ENST00000412087 955 ntBASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms