Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC155Q8N6L0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 ZNF767P-206ENST00000513792 565 ntBASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 EEF1DP1-201ENST00000585891 896 ntBASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 AC006453.4-201ENST00000636949 1252 ntBASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC155Q8N6L0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 AC106881.1-201ENST00000605849 3329 ntBASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 AGAP7P-201ENST00000582299 2062 ntBASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 AGAP14-201ENST00000624701 2060 ntBASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC155Q8N6L0 AL138709.1-201ENST00000614840 1693 ntBASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 MIR1202-201ENST00000408529 83 ntBASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 NUS1P3-201ENST00000423502 862 ntBASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 AC007969.1-201ENST00000433675 447 ntBASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 MIR4741-201ENST00000579822 90 ntBASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 AL008638.5-201ENST00000623814 1298 ntBASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 CICP11-201ENST00000434745 2827 ntBASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms