Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 VDAC1P7-201ENST00000462417 847 ntBASIC18.77■□□□□ 0.6
SKAP1Q86WV1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 MIR8072-201ENST00000614241 80 ntBASIC18.77■□□□□ 0.6
SKAP1Q86WV1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.77■□□□□ 0.6
SKAP1Q86WV1 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SKAP1Q86WV1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SKAP1Q86WV1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SKAP1Q86WV1 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SKAP1Q86WV1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SKAP1Q86WV1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.77■□□□□ 0.59
SKAP1Q86WV1 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SKAP1Q86WV1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.76■□□□□ 0.59
SKAP1Q86WV1 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 FAM90A12P-201ENST00000519497 2375 ntBASIC18.76■□□□□ 0.59
SKAP1Q86WV1 FAM90A24P-201ENST00000520792 2369 ntBASIC18.76■□□□□ 0.59
SKAP1Q86WV1 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 AC004066.1-201ENST00000502488 802 ntBASIC18.76■□□□□ 0.59
SKAP1Q86WV1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 AC004449.1-201ENST00000564240 433 ntBASIC18.76■□□□□ 0.59
SKAP1Q86WV1 AC140878.1-201ENST00000565277 250 ntBASIC18.76■□□□□ 0.59
SKAP1Q86WV1 AC004466.1-201ENST00000599515 1080 ntBASIC18.76■□□□□ 0.59
SKAP1Q86WV1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 AC011498.7-201ENST00000624986 2027 ntBASIC18.76■□□□□ 0.59
SKAP1Q86WV1 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 AL365181.3-201ENST00000605886 3222 ntBASIC18.76■□□□□ 0.59
SKAP1Q86WV1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SKAP1Q86WV1 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 CNN2P2-201ENST00000443536 909 ntBASIC18.75■□□□□ 0.59
SKAP1Q86WV1 CNN2P3-201ENST00000450201 906 ntBASIC18.75■□□□□ 0.59
SKAP1Q86WV1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 AC023310.3-201ENST00000557027 670 ntBASIC18.75■□□□□ 0.59
SKAP1Q86WV1 AC100756.1-201ENST00000562736 682 ntBASIC18.75■□□□□ 0.59
SKAP1Q86WV1 AC104794.3-201ENST00000566840 1248 ntBASIC18.75■□□□□ 0.59
SKAP1Q86WV1 AC138749.3-201ENST00000567691 622 ntBASIC18.75■□□□□ 0.59
SKAP1Q86WV1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.75■□□□□ 0.59
SKAP1Q86WV1 SRD5A3P1-201ENST00000603021 949 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms