Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 AP002761.4-201ENST00000565433 3361 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 RNU1-129P-201ENST00000384064 167 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 AC004945.1-201ENST00000416738 983 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 MTND2P9-201ENST00000422293 931 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 RPS8P6-201ENST00000426177 609 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 MIR3909-201ENST00000579518 119 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 U1.21-201ENST00000580816 167 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 AL009183.1-201ENST00000603760 355 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 AC090950.1-202ENST00000605733 644 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 AL031055.1-201ENST00000606362 631 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 AL451064.1-201ENST00000607718 471 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 AC092902.6-201ENST00000641783 218 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.29■□□□□ 0.04
PACS2Q86VP3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PACS2Q86VP3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.29■□□□□ 0.04
PACS2Q86VP3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 AC109635.5-201ENST00000533593 962 ntBASIC15.28■□□□□ 0.04
PACS2Q86VP3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 SNHG9-202ENST00000564014 471 ntBASIC15.28■□□□□ 0.04
PACS2Q86VP3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
PACS2Q86VP3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PACS2Q86VP3 AC127383.1-201ENST00000444697 1800 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms