Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC007389.4-201ENST00000454674 793 ntBASIC10.08□□□□□ -0.8
SCXQ7RTU7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 MIR6805-201ENST00000615055 62 ntBASIC10.08□□□□□ -0.8
SCXQ7RTU7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 REXO1L8P-201ENST00000604378 1897 ntBASIC10.08□□□□□ -0.8
SCXQ7RTU7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SCXQ7RTU7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.08□□□□□ -0.8
SCXQ7RTU7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 AC079776.1-201ENST00000401540 1152 ntBASIC10.07□□□□□ -0.8
SCXQ7RTU7 MIR1909-201ENST00000411312 80 ntBASIC10.07□□□□□ -0.8
SCXQ7RTU7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 EEF1DP4-201ENST00000446006 880 ntBASIC10.07□□□□□ -0.8
SCXQ7RTU7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TMEM261P1-201ENST00000604899 340 ntBASIC10.07□□□□□ -0.8
SCXQ7RTU7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 MIR8072-201ENST00000614241 80 ntBASIC10.07□□□□□ -0.8
SCXQ7RTU7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 AL033527.5-201ENST00000641382 801 ntBASIC10.07□□□□□ -0.8
SCXQ7RTU7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms