Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14□□□□□ -0.17
TUBA1AQ71U36 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14□□□□□ -0.17
TUBA1AQ71U36 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14□□□□□ -0.17
TUBA1AQ71U36 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14□□□□□ -0.17
TUBA1AQ71U36 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14□□□□□ -0.17
TUBA1AQ71U36 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 AC089987.1-201ENST00000551654 2209 ntBASIC14□□□□□ -0.17
TUBA1AQ71U36 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14□□□□□ -0.17
TUBA1AQ71U36 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14□□□□□ -0.17
TUBA1AQ71U36 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
TUBA1AQ71U36 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14□□□□□ -0.17
TUBA1AQ71U36 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 KRT8P12-202ENST00000472924 1397 ntBASIC13.99□□□□□ -0.17
TUBA1AQ71U36 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AP000845.1-201ENST00000581677 2131 ntBASIC13.99□□□□□ -0.17
TUBA1AQ71U36 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AC004987.2-201ENST00000395959 1148 ntBASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AZGP1P1-201ENST00000411909 902 ntBASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 INGX-202ENST00000489074 768 ntBASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AL512361.1-201ENST00000554200 418 ntBASIC13.99□□□□□ -0.17
TUBA1AQ71U36 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AC011467.4-201ENST00000594891 528 ntBASIC13.99□□□□□ -0.17
TUBA1AQ71U36 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.99□□□□□ -0.17
TUBA1AQ71U36 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1AQ71U36 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 KRT8P37-201ENST00000451609 1420 ntBASIC13.98□□□□□ -0.17
TUBA1AQ71U36 AC015802.1-201ENST00000588104 1449 ntBASIC13.98□□□□□ -0.17
TUBA1AQ71U36 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms