Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 AC015818.8-201ENST00000587907 1519 ntBASIC17.84■□□□□ 0.45
CTR9Q6PD62 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 AL138725.1-201ENST00000407347 1314 ntBASIC17.84■□□□□ 0.45
CTR9Q6PD62 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 RN7SKP175-201ENST00000408472 289 ntBASIC17.84■□□□□ 0.45
CTR9Q6PD62 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 ZACNP1-201ENST00000612259 710 ntBASIC17.84■□□□□ 0.45
CTR9Q6PD62 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 AC023157.3-201ENST00000619086 2088 ntBASIC17.84■□□□□ 0.45
CTR9Q6PD62 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.84■□□□□ 0.45
CTR9Q6PD62 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTR9Q6PD62 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.83■□□□□ 0.45
CTR9Q6PD62 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.83■□□□□ 0.45
CTR9Q6PD62 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.83■□□□□ 0.45
CTR9Q6PD62 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTR9Q6PD62 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CTR9Q6PD62 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTR9Q6PD62 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.83■□□□□ 0.45
CTR9Q6PD62 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTR9Q6PD62 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CTR9Q6PD62 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CTR9Q6PD62 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 AL591846.1-201ENST00000451736 433 ntBASIC17.83■□□□□ 0.44
CTR9Q6PD62 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 AC091271.1-201ENST00000611877 1162 ntBASIC17.83■□□□□ 0.44
CTR9Q6PD62 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 LINC00528-201ENST00000600723 2160 ntBASIC17.83■□□□□ 0.44
CTR9Q6PD62 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.83■□□□□ 0.44
CTR9Q6PD62 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTR9Q6PD62 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 AC003102.2-201ENST00000589195 1469 ntBASIC17.82■□□□□ 0.44
CTR9Q6PD62 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms