Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CNKSR3Q6P9H4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 ORAOV1P1-201ENST00000503108 395 ntBASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 NUDT4P2-201ENST00000578341 546 ntBASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 AC107464.3-201ENST00000609172 737 ntBASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 AC013726.1-201ENST00000563747 2285 ntBASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CNKSR3Q6P9H4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 OR2R1P-201ENST00000441404 914 ntBASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 DUX4L50-201ENST00000455245 715 ntBASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 TMCO5B-205ENST00000530020 894 ntBASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 AC003686.1-201ENST00000550956 1034 ntBASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 AC084781.1-201ENST00000613737 656 ntBASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 AC073911.3-201ENST00000624401 631 ntBASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 AC005618.3-201ENST00000624928 458 ntBASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 AP001184.1-201ENST00000637936 376 ntBASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNKSR3Q6P9H4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 MARK2P16-201ENST00000605714 1723 ntBASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 HIST2H2BA-201ENST00000412169 381 ntBASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 LYPLA2P1-203ENST00000447689 696 ntBASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 MRPL22P1-201ENST00000505398 616 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms