Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 AC105021.1-202ENST00000570572 669 ntBASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 AC026979.3-201ENST00000607315 403 ntBASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
PPP4R4Q6NUP7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 BASP1P1-201ENST00000430708 665 ntBASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 PHKG1P2-201ENST00000457537 863 ntBASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AC051619.7-201ENST00000568314 623 ntBASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AC018442.1-201ENST00000421439 2061 ntBASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 AC131212.3-201ENST00000624087 4219 ntBASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP4R4Q6NUP7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP4R4Q6NUP7 TCAF1P1-201ENST00000414990 2232 ntBASIC14.51□□□□□ -0.09
PPP4R4Q6NUP7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PPP4R4Q6NUP7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PPP4R4Q6NUP7 CETN4P-206ENST00000642099 2168 ntBASIC14.51□□□□□ -0.09
PPP4R4Q6NUP7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PPP4R4Q6NUP7 AP000845.1-201ENST00000581677 2131 ntBASIC14.51□□□□□ -0.09
PPP4R4Q6NUP7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PPP4R4Q6NUP7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PPP4R4Q6NUP7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms