Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 AC011840.2-201ENST00000563063 1520 ntBASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 AC089987.1-201ENST00000551654 2209 ntBASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 AL442647.2-201ENST00000429864 857 ntBASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 TMEM198B-204ENST00000484016 896 ntBASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 AC004466.1-201ENST00000599515 1080 ntBASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKAL1Q5VV42 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 SLC7A15P-201ENST00000424028 1363 ntBASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AL359711.2-201ENST00000563105 872 ntBASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AC093512.1-201ENST00000617969 520 ntBASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AC063926.3-201ENST00000624734 5658 ntBASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AL138725.1-201ENST00000407347 1314 ntBASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 AC215219.1-201ENST00000400706 1817 ntBASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 TCAM1P-207ENST00000485295 1537 ntBASIC16.4■□□□□ 0.22
CDKAL1Q5VV42 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CDKAL1Q5VV42 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms