Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.93■□□□□ 0.14
VARS2Q5ST30 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARS2Q5ST30 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 AC005077.2-201ENST00000449786 690 ntBASIC15.92■□□□□ 0.14
VARS2Q5ST30 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 MIR4783-201ENST00000580343 82 ntBASIC15.92■□□□□ 0.14
VARS2Q5ST30 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 AL023803.2-201ENST00000620080 638 ntBASIC15.92■□□□□ 0.14
VARS2Q5ST30 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 AC023090.2-201ENST00000625182 2110 ntBASIC15.92■□□□□ 0.14
VARS2Q5ST30 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARS2Q5ST30 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.92■□□□□ 0.14
VARS2Q5ST30 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 SHC1P1-201ENST00000425230 1745 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 AC016700.1-201ENST00000429424 312 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 EIF4HP1-201ENST00000453115 687 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 RNMTL1P1-201ENST00000454103 560 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 AC009955.4-201ENST00000597192 544 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 RPAP2P1-201ENST00000603626 1168 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 AC138649.2-201ENST00000615886 705 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 AC022748.3-201ENST00000621828 275 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 AL162426.1-201ENST00000624141 743 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms