Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC27Q2M243 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC27Q2M243 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC27Q2M243 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
CCDC27Q2M243 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 AP001267.2-201ENST00000532619 2086 ntBASIC19.45■□□□□ 0.7
CCDC27Q2M243 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 LINC02228-204ENST00000642115 2962 ntBASIC19.45■□□□□ 0.7
CCDC27Q2M243 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 FES-203ENST00000394302 2133 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 PPY2P-201ENST00000582808 702 ntBASIC19.45■□□□□ 0.7
CCDC27Q2M243 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 AC139712.1-201ENST00000378256 1875 ntBASIC19.45■□□□□ 0.7
CCDC27Q2M243 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC27Q2M243 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC27Q2M243 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 HLA-V-201ENST00000429037 534 ntBASIC19.44■□□□□ 0.7
CCDC27Q2M243 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 AC017083.2-201ENST00000608069 979 ntBASIC19.44■□□□□ 0.7
CCDC27Q2M243 MIR6805-201ENST00000615055 62 ntBASIC19.44■□□□□ 0.7
CCDC27Q2M243 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 KHSRPP1-201ENST00000427983 1768 ntBASIC19.44■□□□□ 0.7
CCDC27Q2M243 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC27Q2M243 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC27Q2M243 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 AC022447.6-201ENST00000515522 438 ntBASIC19.43■□□□□ 0.7
CCDC27Q2M243 IGHV3-71-201ENST00000523324 359 ntBASIC19.43■□□□□ 0.7
CCDC27Q2M243 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms