Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX7Q2KHR2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.02■□□□□ 0.47
RFX7Q2KHR2 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.02■□□□□ 0.47
RFX7Q2KHR2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX7Q2KHR2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX7Q2KHR2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.02■□□□□ 0.47
RFX7Q2KHR2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX7Q2KHR2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RFX7Q2KHR2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX7Q2KHR2 FKBP4P6-201ENST00000457486 1332 ntBASIC18.02■□□□□ 0.47
RFX7Q2KHR2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AC004945.1-201ENST00000416738 983 ntBASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AC100850.1-201ENST00000506768 649 ntBASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 BX088702.1-201ENST00000610784 235 ntBASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AC022748.3-201ENST00000621828 275 ntBASIC18.01■□□□□ 0.47
RFX7Q2KHR2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AC244452.3-201ENST00000636814 210 ntBASIC18.01■□□□□ 0.47
RFX7Q2KHR2 AC113367.3-201ENST00000508316 1912 ntBASIC18.01■□□□□ 0.47
RFX7Q2KHR2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX7Q2KHR2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18■□□□□ 0.47
RFX7Q2KHR2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18■□□□□ 0.47
RFX7Q2KHR2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
RFX7Q2KHR2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
RFX7Q2KHR2 AC140479.7-201ENST00000636301 2332 ntBASIC18■□□□□ 0.47
RFX7Q2KHR2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RFX7Q2KHR2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RFX7Q2KHR2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18■□□□□ 0.47
RFX7Q2KHR2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18■□□□□ 0.47
RFX7Q2KHR2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 HNRNPA1P63-201ENST00000427917 963 ntBASIC18■□□□□ 0.47
RFX7Q2KHR2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 SERPINA13P-202ENST00000478994 924 ntBASIC18■□□□□ 0.47
RFX7Q2KHR2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18■□□□□ 0.47
RFX7Q2KHR2 AC044849.1-201ENST00000519737 1188 ntBASIC18■□□□□ 0.47
RFX7Q2KHR2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RFX7Q2KHR2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18■□□□□ 0.47
RFX7Q2KHR2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18■□□□□ 0.47
RFX7Q2KHR2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18■□□□□ 0.47
RFX7Q2KHR2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18■□□□□ 0.47
RFX7Q2KHR2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 MRPL37P1-201ENST00000592451 1337 ntBASIC18■□□□□ 0.47
RFX7Q2KHR2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18■□□□□ 0.47
RFX7Q2KHR2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18■□□□□ 0.47
RFX7Q2KHR2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX7Q2KHR2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RFX7Q2KHR2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX7Q2KHR2 INE2-201ENST00000630399 1874 ntBASIC17.99■□□□□ 0.47
RFX7Q2KHR2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms