Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 CICP23-201ENST00000605013 2741 ntBASIC17.82■□□□□ 0.44
PDS5AQ29RF7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 KHSRPP1-201ENST00000427983 1768 ntBASIC17.81■□□□□ 0.44
PDS5AQ29RF7 TMBIM7P-202ENST00000641474 1516 ntBASIC17.81■□□□□ 0.44
PDS5AQ29RF7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 KRT18P36-201ENST00000411618 1276 ntBASIC17.81■□□□□ 0.44
PDS5AQ29RF7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 RN7SL11P-201ENST00000471305 293 ntBASIC17.81■□□□□ 0.44
PDS5AQ29RF7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 AL157791.1-201ENST00000553667 1699 ntBASIC17.81■□□□□ 0.44
PDS5AQ29RF7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDS5AQ29RF7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 HYMAI-201ENST00000635591 3347 ntBASIC17.8■□□□□ 0.44
PDS5AQ29RF7 AC018442.1-201ENST00000421439 2061 ntBASIC17.8■□□□□ 0.44
PDS5AQ29RF7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 RNA5SP423-201ENST00000517127 109 ntBASIC17.8■□□□□ 0.44
PDS5AQ29RF7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 RBM8B-201ENST00000555532 525 ntBASIC17.8■□□□□ 0.44
PDS5AQ29RF7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 RN7SL574P-201ENST00000581512 297 ntBASIC17.8■□□□□ 0.44
PDS5AQ29RF7 AC097724.1-201ENST00000609581 426 ntBASIC17.8■□□□□ 0.44
PDS5AQ29RF7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 AC136759.1-202ENST00000530858 2194 ntBASIC17.8■□□□□ 0.44
PDS5AQ29RF7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.8■□□□□ 0.44
PDS5AQ29RF7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 ISCA2P1-201ENST00000425548 448 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms