Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.5□□□□□ -0.25
SCN1BQ07699 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.5□□□□□ -0.25
SCN1BQ07699 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.5□□□□□ -0.25
SCN1BQ07699 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.5□□□□□ -0.25
SCN1BQ07699 AP000842.3-202ENST00000569238 1080 ntBASIC13.5□□□□□ -0.25
SCN1BQ07699 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.5□□□□□ -0.25
SCN1BQ07699 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.5□□□□□ -0.25
SCN1BQ07699 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SCN1BQ07699 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 AC055811.4-201ENST00000624039 1754 ntBASIC13.5□□□□□ -0.25
SCN1BQ07699 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SCN1BQ07699 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.5□□□□□ -0.25
SCN1BQ07699 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCN1BQ07699 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.49□□□□□ -0.25
SCN1BQ07699 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SCN1BQ07699 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.49□□□□□ -0.25
SCN1BQ07699 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.49□□□□□ -0.25
SCN1BQ07699 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 HLA-H-201ENST00000383620 1096 ntBASIC13.49□□□□□ -0.25
SCN1BQ07699 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 AC142381.1-201ENST00000426099 345 ntBASIC13.49□□□□□ -0.25
SCN1BQ07699 AC004832.2-201ENST00000426397 482 ntBASIC13.49□□□□□ -0.25
SCN1BQ07699 AC005237.2-201ENST00000434368 219 ntBASIC13.49□□□□□ -0.25
SCN1BQ07699 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 ACTG1P14-201ENST00000446382 1122 ntBASIC13.49□□□□□ -0.25
SCN1BQ07699 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.49□□□□□ -0.25
SCN1BQ07699 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.49□□□□□ -0.25
SCN1BQ07699 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.49□□□□□ -0.25
SCN1BQ07699 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.49□□□□□ -0.25
SCN1BQ07699 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.49□□□□□ -0.25
SCN1BQ07699 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SCN1BQ07699 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.49□□□□□ -0.25
SCN1BQ07699 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SCN1BQ07699 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
SCN1BQ07699 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
SCN1BQ07699 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCN1BQ07699 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.49□□□□□ -0.25
SCN1BQ07699 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms