Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CDK3Q00526 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.74□□□□□ -0.05
CDK3Q00526 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.74□□□□□ -0.05
CDK3Q00526 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.74□□□□□ -0.05
CDK3Q00526 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.74□□□□□ -0.05
CDK3Q00526 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.74□□□□□ -0.05
CDK3Q00526 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.74□□□□□ -0.05
CDK3Q00526 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.74□□□□□ -0.05
CDK3Q00526 AC243960.2-201ENST00000600996 747 ntBASIC14.74□□□□□ -0.05
CDK3Q00526 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CDK3Q00526 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 AL008638.5-201ENST00000623814 1298 ntBASIC14.74□□□□□ -0.05
CDK3Q00526 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.74□□□□□ -0.05
CDK3Q00526 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.74□□□□□ -0.05
CDK3Q00526 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.74□□□□□ -0.05
CDK3Q00526 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CDK3Q00526 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDK3Q00526 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.74□□□□□ -0.05
CDK3Q00526 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.74□□□□□ -0.05
CDK3Q00526 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.74□□□□□ -0.05
CDK3Q00526 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDK3Q00526 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.74□□□□□ -0.05
CDK3Q00526 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.73□□□□□ -0.05
CDK3Q00526 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.73□□□□□ -0.05
CDK3Q00526 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.73□□□□□ -0.05
CDK3Q00526 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.73□□□□□ -0.05
CDK3Q00526 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.73□□□□□ -0.05
CDK3Q00526 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.73□□□□□ -0.05
CDK3Q00526 AL354877.1-201ENST00000424412 413 ntBASIC14.73□□□□□ -0.05
CDK3Q00526 POM121L10P-201ENST00000436994 1285 ntBASIC14.73□□□□□ -0.05
CDK3Q00526 AC006033.1-201ENST00000440505 426 ntBASIC14.73□□□□□ -0.05
CDK3Q00526 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.73□□□□□ -0.05
CDK3Q00526 AC131206.1-201ENST00000538078 1211 ntBASIC14.73□□□□□ -0.05
CDK3Q00526 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.73□□□□□ -0.05
CDK3Q00526 AL022328.3-201ENST00000607943 679 ntBASIC14.73□□□□□ -0.05
CDK3Q00526 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.73□□□□□ -0.05
CDK3Q00526 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDK3Q00526 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.73□□□□□ -0.05
CDK3Q00526 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 LINC01101-201ENST00000622953 1884 ntBASIC14.73□□□□□ -0.05
CDK3Q00526 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.73□□□□□ -0.05
CDK3Q00526 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.73□□□□□ -0.05
CDK3Q00526 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDK3Q00526 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 AC046158.3-201ENST00000624947 2558 ntBASIC14.73□□□□□ -0.05
CDK3Q00526 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDK3Q00526 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDK3Q00526 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDK3Q00526 AC020907.1-201ENST00000616460 1350 ntBASIC14.73□□□□□ -0.05
CDK3Q00526 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 SHC1P1-201ENST00000425230 1745 ntBASIC14.72□□□□□ -0.05
CDK3Q00526 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.72□□□□□ -0.05
CDK3Q00526 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
CDK3Q00526 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.72□□□□□ -0.05
CDK3Q00526 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms