Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 ZBED1P1-201ENST00000502364 1930 ntBASIC13.29□□□□□ -0.28
SEC61A1P61619 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.29□□□□□ -0.28
SEC61A1P61619 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SEC61A1P61619 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.28□□□□□ -0.28
SEC61A1P61619 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
SEC61A1P61619 SPDYE19P-201ENST00000338590 713 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 AC004987.2-201ENST00000395959 1148 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 AZGP1P1-201ENST00000411909 902 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 PIN1P1-201ENST00000412108 996 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.28□□□□□ -0.28
SEC61A1P61619 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.28□□□□□ -0.28
SEC61A1P61619 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.28□□□□□ -0.28
SEC61A1P61619 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.28□□□□□ -0.28
SEC61A1P61619 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.28□□□□□ -0.28
SEC61A1P61619 AL589987.1-201ENST00000453380 819 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.28□□□□□ -0.28
SEC61A1P61619 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SEC61A1P61619 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.28□□□□□ -0.28
SEC61A1P61619 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SEC61A1P61619 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 AL132655.2-201ENST00000596276 594 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.28□□□□□ -0.28
SEC61A1P61619 AF228730.6-201ENST00000641497 218 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 AC084121.3-201ENST00000641716 218 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 AC105233.6-201ENST00000642093 218 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 BTBD7P1-201ENST00000447253 1453 ntBASIC13.28□□□□□ -0.28
SEC61A1P61619 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.28□□□□□ -0.28
SEC61A1P61619 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61A1P61619 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
SEC61A1P61619 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.28□□□□□ -0.28
SEC61A1P61619 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
SEC61A1P61619 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
SEC61A1P61619 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SEC61A1P61619 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SEC61A1P61619 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SEC61A1P61619 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SEC61A1P61619 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.27□□□□□ -0.28
SEC61A1P61619 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SEC61A1P61619 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.27□□□□□ -0.28
SEC61A1P61619 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SEC61A1P61619 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SEC61A1P61619 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SEC61A1P61619 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SEC61A1P61619 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SEC61A1P61619 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SEC61A1P61619 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 AC114501.2-201ENST00000439631 535 ntBASIC13.27□□□□□ -0.29
SEC61A1P61619 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.27□□□□□ -0.29
SEC61A1P61619 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.27□□□□□ -0.29
SEC61A1P61619 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 AP005018.1-201ENST00000525475 301 ntBASIC13.27□□□□□ -0.29
SEC61A1P61619 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.27□□□□□ -0.29
SEC61A1P61619 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 AC025048.3-201ENST00000590609 569 ntBASIC13.27□□□□□ -0.29
SEC61A1P61619 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 AC005702.4-201ENST00000618393 416 ntBASIC13.27□□□□□ -0.29
SEC61A1P61619 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms