Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.28□□□□□ -0.28
UBE2NP61088 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 AL512343.1-201ENST00000605837 169 ntBASIC13.28□□□□□ -0.28
UBE2NP61088 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2NP61088 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.28□□□□□ -0.28
UBE2NP61088 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UBE2NP61088 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UBE2NP61088 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
UBE2NP61088 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 AL359258.3-201ENST00000622910 2331 ntBASIC13.28□□□□□ -0.28
UBE2NP61088 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBE2NP61088 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2NP61088 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBE2NP61088 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.27□□□□□ -0.28
UBE2NP61088 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.27□□□□□ -0.28
UBE2NP61088 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.27□□□□□ -0.28
UBE2NP61088 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
UBE2NP61088 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 AP000845.1-201ENST00000581677 2131 ntBASIC13.27□□□□□ -0.28
UBE2NP61088 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.27□□□□□ -0.28
UBE2NP61088 AC013268.4-201ENST00000637413 2228 ntBASIC13.27□□□□□ -0.28
UBE2NP61088 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2NP61088 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
UBE2NP61088 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
UBE2NP61088 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 HLA-K-203ENST00000430151 1046 ntBASIC13.27□□□□□ -0.29
UBE2NP61088 ATP5G2P4-201ENST00000442175 420 ntBASIC13.27□□□□□ -0.29
UBE2NP61088 CROCCP4-201ENST00000457096 498 ntBASIC13.27□□□□□ -0.29
UBE2NP61088 AC104989.1-201ENST00000519711 778 ntBASIC13.27□□□□□ -0.29
UBE2NP61088 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2NP61088 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.27□□□□□ -0.29
UBE2NP61088 AC025279.2-201ENST00000569730 653 ntBASIC13.27□□□□□ -0.29
UBE2NP61088 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2NP61088 MIR6805-201ENST00000615055 62 ntBASIC13.27□□□□□ -0.29
UBE2NP61088 AC132938.4-201ENST00000623835 848 ntBASIC13.27□□□□□ -0.29
UBE2NP61088 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.27□□□□□ -0.29
UBE2NP61088 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.27□□□□□ -0.29
UBE2NP61088 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UBE2NP61088 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UBE2NP61088 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2NP61088 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2NP61088 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2NP61088 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.27□□□□□ -0.29
UBE2NP61088 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UBE2NP61088 AC023157.3-201ENST00000619086 2088 ntBASIC13.27□□□□□ -0.29
UBE2NP61088 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2NP61088 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2NP61088 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UBE2NP61088 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2NP61088 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2NP61088 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2NP61088 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2NP61088 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBE2NP61088 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2NP61088 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2NP61088 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms