Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.2■□□□□ 0.02
WNT3AP56704 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.2■□□□□ 0.02
WNT3AP56704 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.2■□□□□ 0.02
WNT3AP56704 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.2■□□□□ 0.02
WNT3AP56704 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.2■□□□□ 0.02
WNT3AP56704 AC015936.2-201ENST00000593177 259 ntBASIC15.2■□□□□ 0.02
WNT3AP56704 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.2■□□□□ 0.02
WNT3AP56704 IGHV3-72-202ENST00000621503 303 ntBASIC15.2■□□□□ 0.02
WNT3AP56704 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.2■□□□□ 0.02
WNT3AP56704 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.2■□□□□ 0.02
WNT3AP56704 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.2■□□□□ 0.02
WNT3AP56704 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
WNT3AP56704 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
WNT3AP56704 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
WNT3AP56704 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
WNT3AP56704 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
WNT3AP56704 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.19■□□□□ 0.02
WNT3AP56704 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.19■□□□□ 0.02
WNT3AP56704 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
WNT3AP56704 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.19■□□□□ 0.02
WNT3AP56704 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.19■□□□□ 0.02
WNT3AP56704 TMEM14DP-201ENST00000422205 345 ntBASIC15.19■□□□□ 0.02
WNT3AP56704 NME2P1-201ENST00000426182 414 ntBASIC15.19■□□□□ 0.02
WNT3AP56704 AC245100.3-201ENST00000441281 285 ntBASIC15.19■□□□□ 0.02
WNT3AP56704 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.19■□□□□ 0.02
WNT3AP56704 AL355864.2-201ENST00000447420 863 ntBASIC15.19■□□□□ 0.02
WNT3AP56704 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.19■□□□□ 0.02
WNT3AP56704 USP32P1-208ENST00000506594 1164 ntBASIC15.19■□□□□ 0.02
WNT3AP56704 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.19■□□□□ 0.02
WNT3AP56704 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.19■□□□□ 0.02
WNT3AP56704 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.19■□□□□ 0.02
WNT3AP56704 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
WNT3AP56704 AC008735.3-201ENST00000596646 500 ntBASIC15.19■□□□□ 0.02
WNT3AP56704 AC105233.6-201ENST00000642093 218 ntBASIC15.19■□□□□ 0.02
WNT3AP56704 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.19■□□□□ 0.02
WNT3AP56704 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
WNT3AP56704 OR2I1P-209ENST00000641730 5365 ntBASIC15.19■□□□□ 0.02
WNT3AP56704 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.19■□□□□ 0.02
WNT3AP56704 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
WNT3AP56704 AC113367.3-201ENST00000508316 1912 ntBASIC15.19■□□□□ 0.02
WNT3AP56704 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.19■□□□□ 0.02
WNT3AP56704 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
WNT3AP56704 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 AL513477.1-201ENST00000602865 2407 ntBASIC15.18■□□□□ 0.02
WNT3AP56704 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.18■□□□□ 0.02
WNT3AP56704 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.18■□□□□ 0.02
WNT3AP56704 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
WNT3AP56704 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.18■□□□□ 0.02
WNT3AP56704 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.18■□□□□ 0.02
WNT3AP56704 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.18■□□□□ 0.02
WNT3AP56704 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.18■□□□□ 0.02
WNT3AP56704 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
WNT3AP56704 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.18■□□□□ 0.02
WNT3AP56704 AC015656.1-201ENST00000624209 3578 ntBASIC15.18■□□□□ 0.02
WNT3AP56704 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
WNT3AP56704 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.18■□□□□ 0.02
WNT3AP56704 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 AC005229.1-201ENST00000392885 409 ntBASIC15.18■□□□□ 0.02
WNT3AP56704 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WNT3AP56704 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms