Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH8P55286 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH8P55286 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH8P55286 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH8P55286 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH8P55286 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH8P55286 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH8P55286 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH8P55286 AC008687.7-202ENST00000637404 953 ntBASIC16.03■□□□□ 0.16
CDH8P55286 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.03■□□□□ 0.16
CDH8P55286 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH8P55286 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH8P55286 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH8P55286 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH8P55286 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDH8P55286 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 LINC01101-201ENST00000622953 1884 ntBASIC16.03■□□□□ 0.16
CDH8P55286 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 SALL4P5-201ENST00000419001 1760 ntBASIC16.03■□□□□ 0.16
CDH8P55286 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH8P55286 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CDH8P55286 MTHFR-210ENST00000641407 2387 ntBASIC16.02■□□□□ 0.16
CDH8P55286 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.02■□□□□ 0.16
CDH8P55286 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CDH8P55286 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH8P55286 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDH8P55286 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 AL138725.1-201ENST00000407347 1314 ntBASIC16.02■□□□□ 0.16
CDH8P55286 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH8P55286 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDH8P55286 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH8P55286 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.02■□□□□ 0.16
CDH8P55286 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDH8P55286 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH8P55286 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
CDH8P55286 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CDH8P55286 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH8P55286 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.02■□□□□ 0.16
CDH8P55286 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CDH8P55286 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.02■□□□□ 0.16
CDH8P55286 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.02■□□□□ 0.15
CDH8P55286 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.02■□□□□ 0.15
CDH8P55286 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
CDH8P55286 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CDH8P55286 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.02■□□□□ 0.15
CDH8P55286 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.02■□□□□ 0.15
CDH8P55286 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.02■□□□□ 0.15
CDH8P55286 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH8P55286 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDH8P55286 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CDH8P55286 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH8P55286 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH8P55286 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.01■□□□□ 0.15
CDH8P55286 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 AC007969.1-201ENST00000433675 447 ntBASIC16.01■□□□□ 0.15
CDH8P55286 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH8P55286 COX5BP1-201ENST00000507622 393 ntBASIC16.01■□□□□ 0.15
CDH8P55286 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.01■□□□□ 0.15
CDH8P55286 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.01■□□□□ 0.15
CDH8P55286 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH8P55286 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CDH8P55286 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH8P55286 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms