Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1LP55160 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1LP55160 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1LP55160 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1LP55160 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 AP006547.1-201ENST00000563435 692 ntBASIC16.41■□□□□ 0.22
NCKAP1LP55160 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 MIR4683-201ENST00000579659 81 ntBASIC16.41■□□□□ 0.22
NCKAP1LP55160 PPY2P-201ENST00000582808 702 ntBASIC16.41■□□□□ 0.22
NCKAP1LP55160 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1LP55160 AL359881.2-201ENST00000602973 570 ntBASIC16.41■□□□□ 0.22
NCKAP1LP55160 BX088702.1-201ENST00000610784 235 ntBASIC16.41■□□□□ 0.22
NCKAP1LP55160 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1LP55160 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1LP55160 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1LP55160 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCKAP1LP55160 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NCKAP1LP55160 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 YBX1P6-201ENST00000442962 1002 ntBASIC16.4■□□□□ 0.22
NCKAP1LP55160 HOMER2P2-201ENST00000451621 847 ntBASIC16.4■□□□□ 0.22
NCKAP1LP55160 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 RNA5SP412-201ENST00000516234 123 ntBASIC16.4■□□□□ 0.22
NCKAP1LP55160 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 AL390755.1-201ENST00000623716 2027 ntBASIC16.4■□□□□ 0.22
NCKAP1LP55160 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NCKAP1LP55160 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCKAP1LP55160 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 AL355994.2-201ENST00000447882 704 ntBASIC16.39■□□□□ 0.21
NCKAP1LP55160 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1LP55160 AC002472.3-201ENST00000640124 621 ntBASIC16.39■□□□□ 0.21
NCKAP1LP55160 KRT8P4-201ENST00000509735 1454 ntBASIC16.39■□□□□ 0.21
NCKAP1LP55160 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1LP55160 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms