Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.19■□□□□ 0.02
LIMK2P53671 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.19■□□□□ 0.02
LIMK2P53671 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.19■□□□□ 0.02
LIMK2P53671 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.19■□□□□ 0.02
LIMK2P53671 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.19■□□□□ 0.02
LIMK2P53671 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.19■□□□□ 0.02
LIMK2P53671 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.19■□□□□ 0.02
LIMK2P53671 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.19■□□□□ 0.02
LIMK2P53671 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.19■□□□□ 0.02
LIMK2P53671 BRI3BPP1-201ENST00000594224 787 ntBASIC15.19■□□□□ 0.02
LIMK2P53671 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.19■□□□□ 0.02
LIMK2P53671 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.19■□□□□ 0.02
LIMK2P53671 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.19■□□□□ 0.02
LIMK2P53671 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.19■□□□□ 0.02
LIMK2P53671 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
LIMK2P53671 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 AC093525.8-201ENST00000624099 1342 ntBASIC15.18■□□□□ 0.02
LIMK2P53671 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.18■□□□□ 0.02
LIMK2P53671 HSPA7-201ENST00000445535 1927 ntBASIC15.18■□□□□ 0.02
LIMK2P53671 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.18■□□□□ 0.02
LIMK2P53671 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LIMK2P53671 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.18■□□□□ 0.02
LIMK2P53671 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.18■□□□□ 0.02
LIMK2P53671 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.18■□□□□ 0.02
LIMK2P53671 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.18■□□□□ 0.02
LIMK2P53671 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.18■□□□□ 0.02
LIMK2P53671 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.18■□□□□ 0.02
LIMK2P53671 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.18■□□□□ 0.02
LIMK2P53671 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 BTNL10-201ENST00000595971 695 ntBASIC15.18■□□□□ 0.02
LIMK2P53671 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.18■□□□□ 0.02
LIMK2P53671 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
LIMK2P53671 RPSAP52-203ENST00000622976 1023 ntBASIC15.18■□□□□ 0.02
LIMK2P53671 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.18■□□□□ 0.02
LIMK2P53671 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 OR2I1P-209ENST00000641730 5365 ntBASIC15.18■□□□□ 0.02
LIMK2P53671 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 AC126755.1-201ENST00000525846 6405 ntBASIC15.18■□□□□ 0.02
LIMK2P53671 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms