Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC135983.4-201ENST00000564116 1262 ntBASIC13□□□□□ -0.33
HCFC1P51610 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13□□□□□ -0.33
HCFC1P51610 MIR3147-201ENST00000577811 66 ntBASIC13□□□□□ -0.33
HCFC1P51610 RN7SL163P-201ENST00000583100 276 ntBASIC13□□□□□ -0.33
HCFC1P51610 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13□□□□□ -0.33
HCFC1P51610 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13□□□□□ -0.33
HCFC1P51610 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13□□□□□ -0.33
HCFC1P51610 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HCFC1P51610 OR6D1P-203ENST00000641209 4860 ntBASIC13□□□□□ -0.33
HCFC1P51610 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13□□□□□ -0.33
HCFC1P51610 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 AC078991.1-201ENST00000437297 610 ntBASIC13□□□□□ -0.33
HCFC1P51610 KLF2P1-201ENST00000447438 1042 ntBASIC13□□□□□ -0.33
HCFC1P51610 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13□□□□□ -0.33
HCFC1P51610 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13□□□□□ -0.33
HCFC1P51610 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
HCFC1P51610 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13□□□□□ -0.33
HCFC1P51610 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13□□□□□ -0.33
HCFC1P51610 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13□□□□□ -0.33
HCFC1P51610 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HCFC1P51610 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 AL513477.1-201ENST00000602865 2407 ntBASIC12.99□□□□□ -0.33
HCFC1P51610 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HCFC1P51610 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.99□□□□□ -0.33
HCFC1P51610 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.99□□□□□ -0.33
HCFC1P51610 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.99□□□□□ -0.33
HCFC1P51610 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.99□□□□□ -0.33
HCFC1P51610 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 AL353770.1-201ENST00000614915 403 ntBASIC12.99□□□□□ -0.33
HCFC1P51610 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.99□□□□□ -0.33
HCFC1P51610 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.99□□□□□ -0.33
HCFC1P51610 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HCFC1P51610 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.99□□□□□ -0.33
HCFC1P51610 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HCFC1P51610 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HCFC1P51610 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms