Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.16□□□□□ -0.46
RAB5CP51148 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB5CP51148 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.16□□□□□ -0.46
RAB5CP51148 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.16□□□□□ -0.46
RAB5CP51148 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB5CP51148 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB5CP51148 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB5CP51148 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB5CP51148 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
RAB5CP51148 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB5CP51148 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RAB5CP51148 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB5CP51148 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB5CP51148 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 AC020910.6-201ENST00000623084 1459 ntBASIC12.15□□□□□ -0.46
RAB5CP51148 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB5CP51148 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 AL607033.1-201ENST00000623900 1599 ntBASIC12.15□□□□□ -0.46
RAB5CP51148 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 AC092474.2-201ENST00000424288 719 ntBASIC12.15□□□□□ -0.46
RAB5CP51148 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB5CP51148 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB5CP51148 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB5CP51148 AC063952.2-201ENST00000498792 1227 ntBASIC12.15□□□□□ -0.46
RAB5CP51148 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB5CP51148 IGHV3-65-201ENST00000523210 341 ntBASIC12.15□□□□□ -0.46
RAB5CP51148 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB5CP51148 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.15□□□□□ -0.46
RAB5CP51148 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.15□□□□□ -0.46
RAB5CP51148 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
RAB5CP51148 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.15□□□□□ -0.46
RAB5CP51148 AC099336.1-202ENST00000602961 463 ntBASIC12.15□□□□□ -0.46
RAB5CP51148 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB5CP51148 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.15□□□□□ -0.46
RAB5CP51148 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.15□□□□□ -0.46
RAB5CP51148 MAPK10-262ENST00000641051 5738 ntBASIC12.15□□□□□ -0.46
RAB5CP51148 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
RAB5CP51148 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB5CP51148 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB5CP51148 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB5CP51148 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
RAB5CP51148 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB5CP51148 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB5CP51148 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB5CP51148 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.14□□□□□ -0.47
RAB5CP51148 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RAB5CP51148 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB5CP51148 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.14□□□□□ -0.47
RAB5CP51148 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.14□□□□□ -0.47
RAB5CP51148 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.14□□□□□ -0.47
RAB5CP51148 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB5CP51148 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
RAB5CP51148 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.14□□□□□ -0.47
RAB5CP51148 AC012615.1-201ENST00000565797 1299 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms