Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
COPB2P35606 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.13■□□□□ 0.33
COPB2P35606 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.13■□□□□ 0.33
COPB2P35606 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.13■□□□□ 0.33
COPB2P35606 AC104073.2-201ENST00000453737 312 ntBASIC17.13■□□□□ 0.33
COPB2P35606 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.13■□□□□ 0.33
COPB2P35606 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.13■□□□□ 0.33
COPB2P35606 IMP3P2-201ENST00000489760 475 ntBASIC17.13■□□□□ 0.33
COPB2P35606 AC125604.1-201ENST00000496255 707 ntBASIC17.13■□□□□ 0.33
COPB2P35606 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.13■□□□□ 0.33
COPB2P35606 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.13■□□□□ 0.33
COPB2P35606 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.13■□□□□ 0.33
COPB2P35606 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.13■□□□□ 0.33
COPB2P35606 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.13■□□□□ 0.33
COPB2P35606 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.13■□□□□ 0.33
COPB2P35606 AL132994.2-201ENST00000603120 687 ntBASIC17.13■□□□□ 0.33
COPB2P35606 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
COPB2P35606 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.13■□□□□ 0.33
COPB2P35606 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.13■□□□□ 0.33
COPB2P35606 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COPB2P35606 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
COPB2P35606 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.13■□□□□ 0.33
COPB2P35606 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.13■□□□□ 0.33
COPB2P35606 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.13■□□□□ 0.33
COPB2P35606 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.13■□□□□ 0.33
COPB2P35606 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.13■□□□□ 0.33
COPB2P35606 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COPB2P35606 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.13■□□□□ 0.33
COPB2P35606 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COPB2P35606 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.12■□□□□ 0.33
COPB2P35606 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COPB2P35606 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.12■□□□□ 0.33
COPB2P35606 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
COPB2P35606 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.12■□□□□ 0.33
COPB2P35606 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
COPB2P35606 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.12■□□□□ 0.33
COPB2P35606 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.12■□□□□ 0.33
COPB2P35606 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.12■□□□□ 0.33
COPB2P35606 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.12■□□□□ 0.33
COPB2P35606 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.12■□□□□ 0.33
COPB2P35606 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
COPB2P35606 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
COPB2P35606 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.12■□□□□ 0.33
COPB2P35606 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
COPB2P35606 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.12■□□□□ 0.33
COPB2P35606 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.12■□□□□ 0.33
COPB2P35606 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.12■□□□□ 0.33
COPB2P35606 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 AC008132.1-202ENST00000342005 1389 ntBASIC17.12■□□□□ 0.33
COPB2P35606 LILRP1-201ENST00000444199 1370 ntBASIC17.12■□□□□ 0.33
COPB2P35606 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
COPB2P35606 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPB2P35606 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 AC006058.4-201ENST00000624016 1670 ntBASIC17.11■□□□□ 0.33
COPB2P35606 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.11■□□□□ 0.33
COPB2P35606 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COPB2P35606 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.11■□□□□ 0.33
COPB2P35606 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.11■□□□□ 0.33
COPB2P35606 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.11■□□□□ 0.33
COPB2P35606 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.11■□□□□ 0.33
COPB2P35606 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.11■□□□□ 0.33
COPB2P35606 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.11■□□□□ 0.33
COPB2P35606 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.11■□□□□ 0.33
COPB2P35606 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 AC009884.2-201ENST00000603110 324 ntBASIC17.11■□□□□ 0.33
COPB2P35606 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.11■□□□□ 0.33
COPB2P35606 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPB2P35606 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.11■□□□□ 0.33
COPB2P35606 PPT1-215ENST00000641471 2368 ntBASIC17.11■□□□□ 0.33
COPB2P35606 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms