Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXA13P31271 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HOXA13P31271 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXA13P31271 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXA13P31271 MIR4783-201ENST00000580343 82 ntBASIC17.06■□□□□ 0.32
HOXA13P31271 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXA13P31271 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXA13P31271 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.06■□□□□ 0.32
HOXA13P31271 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXA13P31271 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HOXA13P31271 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXA13P31271 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXA13P31271 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HOXA13P31271 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXA13P31271 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HOXA13P31271 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA13P31271 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA13P31271 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HOXA13P31271 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.05■□□□□ 0.32
HOXA13P31271 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXA13P31271 AP001258.2-201ENST00000529891 490 ntBASIC17.05■□□□□ 0.32
HOXA13P31271 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HOXA13P31271 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HOXA13P31271 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.05■□□□□ 0.32
HOXA13P31271 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA13P31271 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.05■□□□□ 0.32
HOXA13P31271 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
HOXA13P31271 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA13P31271 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXA13P31271 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA13P31271 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXA13P31271 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA13P31271 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HOXA13P31271 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA13P31271 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXA13P31271 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA13P31271 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 E2F3P2-201ENST00000447755 1422 ntBASIC17.04■□□□□ 0.32
HOXA13P31271 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXA13P31271 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXA13P31271 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXA13P31271 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXA13P31271 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA13P31271 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXA13P31271 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HOXA13P31271 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXA13P31271 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HOXA13P31271 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA13P31271 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HOXA13P31271 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA13P31271 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 AL354877.1-201ENST00000424412 413 ntBASIC17.04■□□□□ 0.32
HOXA13P31271 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA13P31271 POM121L10P-201ENST00000436994 1285 ntBASIC17.04■□□□□ 0.32
HOXA13P31271 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXA13P31271 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA13P31271 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXA13P31271 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXA13P31271 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA13P31271 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA13P31271 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms