Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC14.91□□□□□ -0.02
VARSP26640 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.91□□□□□ -0.02
VARSP26640 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
VARSP26640 RAB43P1-201ENST00000561790 589 ntBASIC14.91□□□□□ -0.02
VARSP26640 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.91□□□□□ -0.02
VARSP26640 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.91□□□□□ -0.02
VARSP26640 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.91□□□□□ -0.02
VARSP26640 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.91□□□□□ -0.02
VARSP26640 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.91□□□□□ -0.02
VARSP26640 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.91□□□□□ -0.02
VARSP26640 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.91□□□□□ -0.02
VARSP26640 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 AC027601.5-201ENST00000624065 2482 ntBASIC14.9□□□□□ -0.02
VARSP26640 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.9□□□□□ -0.02
VARSP26640 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 FAM86LP-201ENST00000478302 853 ntBASIC14.9□□□□□ -0.02
VARSP26640 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 AC055876.2-201ENST00000531834 546 ntBASIC14.9□□□□□ -0.02
VARSP26640 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.9□□□□□ -0.02
VARSP26640 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VARSP26640 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.9□□□□□ -0.02
VARSP26640 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VARSP26640 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 CICP8-201ENST00000455800 2813 ntBASIC14.9□□□□□ -0.02
VARSP26640 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VARSP26640 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.9□□□□□ -0.02
VARSP26640 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.9□□□□□ -0.02
VARSP26640 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.89□□□□□ -0.03
VARSP26640 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.89□□□□□ -0.03
VARSP26640 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
VARSP26640 OR2I1P-210ENST00000642037 4691 ntBASIC14.89□□□□□ -0.03
VARSP26640 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms