Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CICP23-201ENST00000605013 2741 ntBASIC14.86□□□□□ -0.03
CDH3P22223 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH3P22223 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH3P22223 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CDH3P22223 ST20-AS1-201ENST00000560255 4223 ntBASIC14.85□□□□□ -0.03
CDH3P22223 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH3P22223 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH3P22223 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH3P22223 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDH3P22223 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 BOLA2P3-201ENST00000404566 256 ntBASIC14.85□□□□□ -0.03
CDH3P22223 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.85□□□□□ -0.03
CDH3P22223 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CDH3P22223 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH3P22223 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH3P22223 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH3P22223 AL512343.1-201ENST00000605837 169 ntBASIC14.85□□□□□ -0.03
CDH3P22223 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH3P22223 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.85□□□□□ -0.03
CDH3P22223 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CDH3P22223 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 AC009090.5-201ENST00000624886 2285 ntBASIC14.85□□□□□ -0.03
CDH3P22223 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH3P22223 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CDH3P22223 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CDH3P22223 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH3P22223 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH3P22223 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH3P22223 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH3P22223 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH3P22223 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CDH3P22223 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH3P22223 AC012441.1-201ENST00000446669 685 ntBASIC14.84□□□□□ -0.03
CDH3P22223 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH3P22223 CROCCP4-201ENST00000457096 498 ntBASIC14.84□□□□□ -0.03
CDH3P22223 KRT18P25-201ENST00000508931 1278 ntBASIC14.84□□□□□ -0.03
CDH3P22223 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.84□□□□□ -0.03
CDH3P22223 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH3P22223 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH3P22223 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH3P22223 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH3P22223 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH3P22223 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CDH3P22223 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH3P22223 AL109954.1-202ENST00000564051 2148 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms