Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NCLP19338 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NCLP19338 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NCLP19338 AC136604.1-201ENST00000418535 575 ntBASIC18.05■□□□□ 0.48
NCLP19338 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.05■□□□□ 0.48
NCLP19338 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.05■□□□□ 0.48
NCLP19338 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.05■□□□□ 0.48
NCLP19338 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.05■□□□□ 0.48
NCLP19338 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.05■□□□□ 0.48
NCLP19338 AL390955.2-201ENST00000603032 514 ntBASIC18.05■□□□□ 0.48
NCLP19338 AL096865.1-201ENST00000606796 927 ntBASIC18.05■□□□□ 0.48
NCLP19338 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NCLP19338 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.05■□□□□ 0.48
NCLP19338 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NCLP19338 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.05■□□□□ 0.48
NCLP19338 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
NCLP19338 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC18.05■□□□□ 0.48
NCLP19338 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC18.04■□□□□ 0.48
NCLP19338 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.04■□□□□ 0.48
NCLP19338 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC18.04■□□□□ 0.48
NCLP19338 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.04■□□□□ 0.48
NCLP19338 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NCLP19338 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NCLP19338 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
NCLP19338 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 BCRP1-201ENST00000444246 691 ntBASIC18.04■□□□□ 0.48
NCLP19338 KLF2P3-201ENST00000451977 1087 ntBASIC18.04■□□□□ 0.48
NCLP19338 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.04■□□□□ 0.48
NCLP19338 AC092364.2-202ENST00000597012 1073 ntBASIC18.04■□□□□ 0.48
NCLP19338 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.04■□□□□ 0.48
NCLP19338 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NCLP19338 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.04■□□□□ 0.48
NCLP19338 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NCLP19338 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
NCLP19338 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 AC084364.1-201ENST00000551967 1556 ntBASIC18.04■□□□□ 0.48
NCLP19338 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.04■□□□□ 0.48
NCLP19338 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.04■□□□□ 0.48
NCLP19338 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
NCLP19338 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCLP19338 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.03■□□□□ 0.48
NCLP19338 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
NCLP19338 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.03■□□□□ 0.48
NCLP19338 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
NCLP19338 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.03■□□□□ 0.48
NCLP19338 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NCLP19338 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NCLP19338 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.03■□□□□ 0.48
NCLP19338 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.03■□□□□ 0.48
NCLP19338 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.03■□□□□ 0.48
NCLP19338 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.03■□□□□ 0.48
NCLP19338 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.03■□□□□ 0.48
NCLP19338 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCLP19338 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.03■□□□□ 0.48
NCLP19338 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC18.03■□□□□ 0.48
NCLP19338 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms