Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 INTS4P1-203ENST00000641008 3683 ntBASIC12.45□□□□□ -0.42
CCL3L1P16619 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 AC106881.1-201ENST00000605849 3329 ntBASIC12.45□□□□□ -0.42
CCL3L1P16619 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 AL138709.1-201ENST00000614840 1693 ntBASIC12.45□□□□□ -0.42
CCL3L1P16619 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CCL3L1P16619 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL3L1P16619 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CCL3L1P16619 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CCL3L1P16619 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 AC063926.2-201ENST00000623766 1308 ntBASIC12.44□□□□□ -0.42
CCL3L1P16619 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 AC013726.1-201ENST00000563747 2285 ntBASIC12.44□□□□□ -0.42
CCL3L1P16619 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCL3L1P16619 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CCL3L1P16619 CICP23-201ENST00000605013 2741 ntBASIC12.44□□□□□ -0.42
CCL3L1P16619 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CCL3L1P16619 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CCL3L1P16619 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CCL3L1P16619 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.44□□□□□ -0.42
CCL3L1P16619 AC092933.1-201ENST00000393644 945 ntBASIC12.44□□□□□ -0.42
CCL3L1P16619 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL3L1P16619 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.44□□□□□ -0.42
CCL3L1P16619 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL3L1P16619 FO681548.1-201ENST00000455617 1132 ntBASIC12.44□□□□□ -0.42
CCL3L1P16619 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL3L1P16619 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.44□□□□□ -0.42
CCL3L1P16619 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.44□□□□□ -0.42
CCL3L1P16619 AC244669.2-201ENST00000612320 853 ntBASIC12.44□□□□□ -0.42
CCL3L1P16619 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CCL3L1P16619 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 AC018529.2-202ENST00000611482 3087 ntBASIC12.44□□□□□ -0.42
CCL3L1P16619 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL3L1P16619 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL3L1P16619 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CCL3L1P16619 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL3L1P16619 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
CCL3L1P16619 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL3L1P16619 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CCL3L1P16619 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CCL3L1P16619 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CCL3L1P16619 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
CCL3L1P16619 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL3L1P16619 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms