Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
DEFA4P12838 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.34□□□□□ -0.43
DEFA4P12838 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.34□□□□□ -0.43
DEFA4P12838 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.34□□□□□ -0.43
DEFA4P12838 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.34□□□□□ -0.43
DEFA4P12838 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
DEFA4P12838 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
DEFA4P12838 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.33□□□□□ -0.43
DEFA4P12838 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
DEFA4P12838 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.33□□□□□ -0.43
DEFA4P12838 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
DEFA4P12838 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA4P12838 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA4P12838 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 ACE3P-201ENST00000423435 1973 ntBASIC12.33□□□□□ -0.44
DEFA4P12838 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
DEFA4P12838 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 RPL37AP1-201ENST00000412502 279 ntBASIC12.33□□□□□ -0.44
DEFA4P12838 AL080243.2-201ENST00000418783 582 ntBASIC12.33□□□□□ -0.44
DEFA4P12838 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.33□□□□□ -0.44
DEFA4P12838 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.33□□□□□ -0.44
DEFA4P12838 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.33□□□□□ -0.44
DEFA4P12838 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.33□□□□□ -0.44
DEFA4P12838 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA4P12838 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.33□□□□□ -0.44
DEFA4P12838 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.33□□□□□ -0.44
DEFA4P12838 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.33□□□□□ -0.44
DEFA4P12838 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.33□□□□□ -0.44
DEFA4P12838 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
DEFA4P12838 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.33□□□□□ -0.44
DEFA4P12838 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.33□□□□□ -0.44
DEFA4P12838 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA4P12838 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.33□□□□□ -0.44
DEFA4P12838 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.33□□□□□ -0.44
DEFA4P12838 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.33□□□□□ -0.44
DEFA4P12838 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
DEFA4P12838 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.33□□□□□ -0.44
DEFA4P12838 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
DEFA4P12838 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
DEFA4P12838 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms