Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TPRP12270 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TPRP12270 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.02□□□□□ -0.16
TPRP12270 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TPRP12270 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TPRP12270 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TPRP12270 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.02□□□□□ -0.17
TPRP12270 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TPRP12270 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.02□□□□□ -0.17
TPRP12270 AL158070.2-201ENST00000623713 1621 ntBASIC14.02□□□□□ -0.17
TPRP12270 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.02□□□□□ -0.17
TPRP12270 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.02□□□□□ -0.17
TPRP12270 TPT1P6-201ENST00000458298 514 ntBASIC14.02□□□□□ -0.17
TPRP12270 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.02□□□□□ -0.17
TPRP12270 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.02□□□□□ -0.17
TPRP12270 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.02□□□□□ -0.17
TPRP12270 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC14.02□□□□□ -0.17
TPRP12270 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TPRP12270 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.02□□□□□ -0.17
TPRP12270 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 E2F3P2-201ENST00000447755 1422 ntBASIC14.02□□□□□ -0.17
TPRP12270 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
TPRP12270 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TPRP12270 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 INE2-201ENST00000630399 1874 ntBASIC14.01□□□□□ -0.17
TPRP12270 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TPRP12270 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TPRP12270 AC011676.5-201ENST00000624864 2660 ntBASIC14.01□□□□□ -0.17
TPRP12270 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TPRP12270 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 HNRNPABP1-201ENST00000406003 734 ntBASIC14.01□□□□□ -0.17
TPRP12270 BANF1P3-201ENST00000412556 261 ntBASIC14.01□□□□□ -0.17
TPRP12270 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC14.01□□□□□ -0.17
TPRP12270 NAT9-219ENST00000582524 573 ntTSL 4 BASIC14.01□□□□□ -0.17
TPRP12270 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 AC134407.2-201ENST00000625089 1978 ntBASIC14.01□□□□□ -0.17
TPRP12270 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TPRP12270 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 RN7SKP175-201ENST00000408472 289 ntBASIC14.01□□□□□ -0.17
TPRP12270 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.01□□□□□ -0.17
TPRP12270 AC100827.2-201ENST00000563214 1194 ntBASIC14.01□□□□□ -0.17
TPRP12270 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.01□□□□□ -0.17
TPRP12270 AL160191.2-201ENST00000603975 601 ntBASIC14.01□□□□□ -0.17
TPRP12270 AC006986.1-201ENST00000612764 241 ntBASIC14.01□□□□□ -0.17
TPRP12270 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TPRP12270 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TPRP12270 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms