Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
UBL4AP11441 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.02□□□□□ -0.16
UBL4AP11441 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBL4AP11441 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBL4AP11441 AC099521.3-201ENST00000624251 2938 ntBASIC14.02□□□□□ -0.16
UBL4AP11441 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBL4AP11441 LINC00552-201ENST00000625151 2579 ntBASIC14.02□□□□□ -0.16
UBL4AP11441 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.02□□□□□ -0.16
UBL4AP11441 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBL4AP11441 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBL4AP11441 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBL4AP11441 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.02□□□□□ -0.16
UBL4AP11441 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBL4AP11441 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBL4AP11441 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.02□□□□□ -0.16
UBL4AP11441 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.02□□□□□ -0.17
UBL4AP11441 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.02□□□□□ -0.17
UBL4AP11441 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
UBL4AP11441 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 AL645937.2-201ENST00000396808 931 ntBASIC14.02□□□□□ -0.17
UBL4AP11441 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.02□□□□□ -0.17
UBL4AP11441 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
UBL4AP11441 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.02□□□□□ -0.17
UBL4AP11441 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.02□□□□□ -0.17
UBL4AP11441 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
UBL4AP11441 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.02□□□□□ -0.17
UBL4AP11441 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
UBL4AP11441 AC140912.1-201ENST00000577171 1054 ntBASIC14.02□□□□□ -0.17
UBL4AP11441 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.02□□□□□ -0.17
UBL4AP11441 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.02□□□□□ -0.17
UBL4AP11441 CHCHD2P3-201ENST00000603038 451 ntBASIC14.02□□□□□ -0.17
UBL4AP11441 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.02□□□□□ -0.17
UBL4AP11441 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.02□□□□□ -0.17
UBL4AP11441 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.02□□□□□ -0.17
UBL4AP11441 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
UBL4AP11441 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
UBL4AP11441 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.02□□□□□ -0.17
UBL4AP11441 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.02□□□□□ -0.17
UBL4AP11441 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.02□□□□□ -0.17
UBL4AP11441 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.02□□□□□ -0.17
UBL4AP11441 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.02□□□□□ -0.17
UBL4AP11441 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.02□□□□□ -0.17
UBL4AP11441 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBL4AP11441 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.01□□□□□ -0.17
UBL4AP11441 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
UBL4AP11441 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UBL4AP11441 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBL4AP11441 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
UBL4AP11441 AL158070.2-201ENST00000623713 1621 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 AJ011931.1-201ENST00000618749 2492 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 CICP17-201ENST00000418553 2377 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 AL360270.3-201ENST00000609118 1348 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.01□□□□□ -0.17
UBL4AP11441 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.01□□□□□ -0.17
UBL4AP11441 AC098850.1-201ENST00000419919 790 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.01□□□□□ -0.17
UBL4AP11441 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.01□□□□□ -0.17
UBL4AP11441 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.01□□□□□ -0.17
UBL4AP11441 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.01□□□□□ -0.17
UBL4AP11441 API5-211ENST00000534695 560 ntTSL 5 BASIC14.01□□□□□ -0.17
UBL4AP11441 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.01□□□□□ -0.17
UBL4AP11441 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.01□□□□□ -0.17
UBL4AP11441 AC124283.3-201ENST00000570869 594 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.01□□□□□ -0.17
UBL4AP11441 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UBL4AP11441 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.01□□□□□ -0.17
UBL4AP11441 AC133539.2-201ENST00000604757 467 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 TMEM261P1-201ENST00000604899 340 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 AC008494.3-201ENST00000606615 944 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.01□□□□□ -0.17
UBL4AP11441 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
UBL4AP11441 BX539320.1-201ENST00000623759 877 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms