Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGAP10645 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGAP10645 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC21.46■■□□□ 1.03
CHGAP10645 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGAP10645 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC21.46■■□□□ 1.03
CHGAP10645 AC078991.1-201ENST00000437297 610 ntBASIC21.46■■□□□ 1.03
CHGAP10645 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CHGAP10645 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGAP10645 NPM1P43-201ENST00000558669 786 ntBASIC21.46■■□□□ 1.03
CHGAP10645 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGAP10645 AC087045.2-201ENST00000606279 1003 ntBASIC21.46■■□□□ 1.03
CHGAP10645 AL157813.1-201ENST00000612996 587 ntBASIC21.46■■□□□ 1.03
CHGAP10645 AC027601.3-201ENST00000622907 509 ntBASIC21.46■■□□□ 1.03
CHGAP10645 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGAP10645 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGAP10645 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGAP10645 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGAP10645 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGAP10645 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC21.46■■□□□ 1.03
CHGAP10645 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGAP10645 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGAP10645 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHGAP10645 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC21.46■■□□□ 1.03
CHGAP10645 SALL4P5-201ENST00000419001 1760 ntBASIC21.46■■□□□ 1.03
CHGAP10645 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHGAP10645 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CHGAP10645 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CHGAP10645 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
CHGAP10645 RAN-210ENST00000541630 1475 ntTSL 2 BASIC21.45■■□□□ 1.03
CHGAP10645 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CHGAP10645 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CHGAP10645 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC21.45■■□□□ 1.02
CHGAP10645 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 SERF2-209ENST00000409646 559 ntTSL 4 BASIC21.45■■□□□ 1.02
CHGAP10645 AC078875.1-201ENST00000431907 724 ntBASIC21.45■■□□□ 1.02
CHGAP10645 AC135983.4-201ENST00000564116 1262 ntBASIC21.45■■□□□ 1.02
CHGAP10645 AP000845.1-201ENST00000581677 2131 ntBASIC21.45■■□□□ 1.02
CHGAP10645 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CHGAP10645 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CHGAP10645 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CHGAP10645 AL118508.1-201ENST00000613502 2345 ntBASIC21.45■■□□□ 1.02
CHGAP10645 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHGAP10645 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CHGAP10645 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CHGAP10645 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC21.44■■□□□ 1.02
CHGAP10645 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC21.44■■□□□ 1.02
CHGAP10645 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC21.44■■□□□ 1.02
CHGAP10645 RN7SL67P-201ENST00000492147 296 ntBASIC21.44■■□□□ 1.02
CHGAP10645 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC21.44■■□□□ 1.02
CHGAP10645 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC21.44■■□□□ 1.02
CHGAP10645 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC21.44■■□□□ 1.02
CHGAP10645 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHGAP10645 AC026803.1-201ENST00000569130 274 ntBASIC21.44■■□□□ 1.02
CHGAP10645 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CHGAP10645 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC21.44■■□□□ 1.02
CHGAP10645 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC21.44■■□□□ 1.02
CHGAP10645 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.44■■□□□ 1.02
CHGAP10645 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC21.44■■□□□ 1.02
CHGAP10645 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC21.44■■□□□ 1.02
CHGAP10645 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHGAP10645 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHGAP10645 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHGAP10645 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGAP10645 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGAP10645 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms