Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TPM1-223ENST00000560445 485 ntTSL 3 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 AC007881.3-201ENST00000608897 607 ntBASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 SALL4P5-201ENST00000419001 1760 ntBASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 AC015909.3-201ENST00000572855 1794 ntBASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 AC090616.6-203ENST00000579186 1945 ntBASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSB-PGBD3P0DP91 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 TLE1P1-201ENST00000422965 589 ntBASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSB-PGBD3P0DP91 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 AL583805.1-201ENST00000391389 531 ntBASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 AL645933.1-201ENST00000440087 609 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms