Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC6P09630 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC6P09630 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
HOXC6P09630 HLA-C-210ENST00000640219 976 ntBASIC16.81■□□□□ 0.28
HOXC6P09630 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC6P09630 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC6P09630 AC136621.1-201ENST00000624017 2304 ntBASIC16.81■□□□□ 0.28
HOXC6P09630 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC6P09630 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 CYP4F23P-201ENST00000593402 1579 ntBASIC16.81■□□□□ 0.28
HOXC6P09630 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC6P09630 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC6P09630 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC6P09630 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC6P09630 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC6P09630 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 FRMPD2B-201ENST00000431305 1347 ntBASIC16.8■□□□□ 0.28
HOXC6P09630 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
HOXC6P09630 RPS9P1-201ENST00000419943 583 ntBASIC16.8■□□□□ 0.28
HOXC6P09630 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC6P09630 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 RPL7P35-201ENST00000446943 740 ntBASIC16.8■□□□□ 0.28
HOXC6P09630 GCOM2-201ENST00000509133 1104 ntBASIC16.8■□□□□ 0.28
HOXC6P09630 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.8■□□□□ 0.28
HOXC6P09630 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 AC131206.1-201ENST00000538078 1211 ntBASIC16.8■□□□□ 0.28
HOXC6P09630 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC6P09630 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC6P09630 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.8■□□□□ 0.28
HOXC6P09630 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC6P09630 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HOXC6P09630 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.8■□□□□ 0.28
HOXC6P09630 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC6P09630 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC6P09630 AC007718.1-201ENST00000621078 280 ntBASIC16.8■□□□□ 0.28
HOXC6P09630 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HOXC6P09630 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC6P09630 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HOXC6P09630 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HOXC6P09630 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC6P09630 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 SSR4P1-203ENST00000599569 2260 ntBASIC16.8■□□□□ 0.28
HOXC6P09630 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC6P09630 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 CAP2P1-201ENST00000557743 1390 ntBASIC16.79■□□□□ 0.28
HOXC6P09630 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC6P09630 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC6P09630 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC6P09630 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HOXC6P09630 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 ZBED1P1-201ENST00000502364 1930 ntBASIC16.79■□□□□ 0.28
HOXC6P09630 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXC6P09630 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC6P09630 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXC6P09630 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 AP002803.1-201ENST00000528836 498 ntBASIC16.79■□□□□ 0.28
HOXC6P09630 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC6P09630 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXC6P09630 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXC6P09630 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC6P09630 AC133540.1-201ENST00000620845 1019 ntBASIC16.79■□□□□ 0.28
HOXC6P09630 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms