Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6AP02538 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6AP02538 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
KRT6AP02538 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
KRT6AP02538 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6AP02538 AC018665.1-201ENST00000622927 1362 ntBASIC14.65□□□□□ -0.06
KRT6AP02538 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT6AP02538 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
KRT6AP02538 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
KRT6AP02538 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT6AP02538 HLA-K-203ENST00000430151 1046 ntBASIC14.65□□□□□ -0.06
KRT6AP02538 AC093214.1-201ENST00000511688 1107 ntBASIC14.65□□□□□ -0.06
KRT6AP02538 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT6AP02538 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT6AP02538 AC023310.3-201ENST00000557027 670 ntBASIC14.65□□□□□ -0.06
KRT6AP02538 AC100756.1-201ENST00000562736 682 ntBASIC14.65□□□□□ -0.06
KRT6AP02538 AC138749.3-201ENST00000567691 622 ntBASIC14.65□□□□□ -0.06
KRT6AP02538 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.65□□□□□ -0.06
KRT6AP02538 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
KRT6AP02538 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.65□□□□□ -0.06
KRT6AP02538 AC116165.1-201ENST00000611806 668 ntBASIC14.65□□□□□ -0.06
KRT6AP02538 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6AP02538 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 AL137783.1-201ENST00000623494 1896 ntBASIC14.65□□□□□ -0.06
KRT6AP02538 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
KRT6AP02538 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6AP02538 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6AP02538 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT6AP02538 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT6AP02538 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
KRT6AP02538 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
KRT6AP02538 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT6AP02538 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.64□□□□□ -0.07
KRT6AP02538 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
KRT6AP02538 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.64□□□□□ -0.07
KRT6AP02538 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT6AP02538 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.64□□□□□ -0.07
KRT6AP02538 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 SPDYE19P-201ENST00000338590 713 ntBASIC14.64□□□□□ -0.07
KRT6AP02538 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
KRT6AP02538 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.64□□□□□ -0.07
KRT6AP02538 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT6AP02538 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT6AP02538 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
KRT6AP02538 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.64□□□□□ -0.07
KRT6AP02538 AC104596.2-201ENST00000512793 793 ntBASIC14.64□□□□□ -0.07
KRT6AP02538 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT6AP02538 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.64□□□□□ -0.07
KRT6AP02538 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.64□□□□□ -0.07
KRT6AP02538 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT6AP02538 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT6AP02538 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.64□□□□□ -0.07
KRT6AP02538 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.64□□□□□ -0.07
KRT6AP02538 AL390955.2-201ENST00000603032 514 ntBASIC14.64□□□□□ -0.07
KRT6AP02538 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 AL662799.1-202ENST00000614205 422 ntBASIC14.64□□□□□ -0.07
KRT6AP02538 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT6AP02538 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT6AP02538 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
KRT6AP02538 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms