Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX6O95503 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX6O95503 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CBX6O95503 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX6O95503 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX6O95503 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX6O95503 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CBX6O95503 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CBX6O95503 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 RPL5P21-201ENST00000404620 815 ntBASIC15.11■□□□□ 0.01
CBX6O95503 TSSK5P-201ENST00000423978 907 ntBASIC15.11■□□□□ 0.01
CBX6O95503 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.11■□□□□ 0.01
CBX6O95503 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.11■□□□□ 0.01
CBX6O95503 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX6O95503 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX6O95503 AC004233.3-201ENST00000607794 1269 ntBASIC15.11■□□□□ 0.01
CBX6O95503 AC073592.8-201ENST00000624126 511 ntBASIC15.11■□□□□ 0.01
CBX6O95503 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX6O95503 AL136982.4-201ENST00000437689 1740 ntBASIC15.11■□□□□ 0.01
CBX6O95503 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX6O95503 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX6O95503 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX6O95503 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.11■□□□□ 0.01
CBX6O95503 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX6O95503 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CBX6O95503 AC084364.1-201ENST00000551967 1556 ntBASIC15.11■□□□□ 0.01
CBX6O95503 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CBX6O95503 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.11■□□□□ 0.01
CBX6O95503 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.1■□□□□ 0.01
CBX6O95503 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CBX6O95503 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CBX6O95503 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.1■□□□□ 0.01
CBX6O95503 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX6O95503 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CBX6O95503 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CBX6O95503 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.1■□□□□ 0.01
CBX6O95503 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 PHKG1P2-201ENST00000457537 863 ntBASIC15.1■□□□□ 0.01
CBX6O95503 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CBX6O95503 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.1■□□□□ 0.01
CBX6O95503 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.1■□□□□ 0.01
CBX6O95503 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.1■□□□□ 0.01
CBX6O95503 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.1■□□□□ 0.01
CBX6O95503 AC061975.2-201ENST00000581722 295 ntBASIC15.1■□□□□ 0.01
CBX6O95503 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.1■□□□□ 0.01
CBX6O95503 AC097359.3-201ENST00000603982 1210 ntBASIC15.1■□□□□ 0.01
CBX6O95503 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CBX6O95503 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX6O95503 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CBX6O95503 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX6O95503 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CBX6O95503 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CBX6O95503 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX6O95503 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CBX6O95503 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX6O95503 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CBX6O95503 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms