Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SNX4O95219 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SNX4O95219 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX4O95219 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
SNX4O95219 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.25□□□□□ -0.13
SNX4O95219 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX4O95219 COX5BP8-201ENST00000416911 349 ntBASIC14.25□□□□□ -0.13
SNX4O95219 AC098850.1-201ENST00000419919 790 ntBASIC14.25□□□□□ -0.13
SNX4O95219 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX4O95219 AC134915.1-201ENST00000426461 574 ntBASIC14.25□□□□□ -0.13
SNX4O95219 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.25□□□□□ -0.13
SNX4O95219 KRT17P7-201ENST00000451704 1104 ntBASIC14.25□□□□□ -0.13
SNX4O95219 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.25□□□□□ -0.13
SNX4O95219 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.25□□□□□ -0.13
SNX4O95219 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.25□□□□□ -0.13
SNX4O95219 CTBP2P3-201ENST00000585629 1255 ntBASIC14.25□□□□□ -0.13
SNX4O95219 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 C18orf15-201ENST00000623680 2534 ntBASIC14.25□□□□□ -0.13
SNX4O95219 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SNX4O95219 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.25□□□□□ -0.13
SNX4O95219 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SNX4O95219 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX4O95219 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX4O95219 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SNX4O95219 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNX4O95219 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.25□□□□□ -0.13
SNX4O95219 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.24□□□□□ -0.13
SNX4O95219 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.24□□□□□ -0.13
SNX4O95219 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.24□□□□□ -0.13
SNX4O95219 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SNX4O95219 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.24□□□□□ -0.13
SNX4O95219 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SNX4O95219 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.24□□□□□ -0.13
SNX4O95219 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.24□□□□□ -0.13
SNX4O95219 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.24□□□□□ -0.13
SNX4O95219 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.24□□□□□ -0.13
SNX4O95219 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.24□□□□□ -0.13
SNX4O95219 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.24□□□□□ -0.13
SNX4O95219 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 AL035252.4-201ENST00000624174 288 ntBASIC14.24□□□□□ -0.13
SNX4O95219 AL033527.5-201ENST00000641382 801 ntBASIC14.24□□□□□ -0.13
SNX4O95219 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 AC092127.1-201ENST00000567093 3455 ntBASIC14.24□□□□□ -0.13
SNX4O95219 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.24□□□□□ -0.13
SNX4O95219 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNX4O95219 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.24□□□□□ -0.13
SNX4O95219 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SNX4O95219 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX4O95219 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX4O95219 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SNX4O95219 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SNX4O95219 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SNX4O95219 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX4O95219 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX4O95219 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SNX4O95219 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX4O95219 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX4O95219 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNX4O95219 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms