Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN2BO60939 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.3□□□□□ -0.12
SCN2BO60939 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.3□□□□□ -0.12
SCN2BO60939 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SCN2BO60939 AC152010.1-201ENST00000415779 2006 ntBASIC14.3□□□□□ -0.12
SCN2BO60939 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SCN2BO60939 AC041040.2-201ENST00000622926 2899 ntBASIC14.3□□□□□ -0.12
SCN2BO60939 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SCN2BO60939 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN2BO60939 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN2BO60939 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SCN2BO60939 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SCN2BO60939 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
SCN2BO60939 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SCN2BO60939 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN2BO60939 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN2BO60939 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SCN2BO60939 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SCN2BO60939 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.29□□□□□ -0.12
SCN2BO60939 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.29□□□□□ -0.12
SCN2BO60939 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.29□□□□□ -0.12
SCN2BO60939 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SCN2BO60939 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.29□□□□□ -0.12
SCN2BO60939 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN2BO60939 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.29□□□□□ -0.12
SCN2BO60939 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.29□□□□□ -0.12
SCN2BO60939 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN2BO60939 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
SCN2BO60939 AC093813.1-201ENST00000605066 256 ntBASIC14.29□□□□□ -0.12
SCN2BO60939 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.29□□□□□ -0.12
SCN2BO60939 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.29□□□□□ -0.12
SCN2BO60939 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.29□□□□□ -0.12
SCN2BO60939 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.29□□□□□ -0.12
SCN2BO60939 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.29□□□□□ -0.12
SCN2BO60939 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.29□□□□□ -0.12
SCN2BO60939 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SCN2BO60939 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.29□□□□□ -0.12
SCN2BO60939 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SCN2BO60939 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SCN2BO60939 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SCN2BO60939 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN2BO60939 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN2BO60939 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 AL928921.2-201ENST00000641325 2442 ntBASIC14.29□□□□□ -0.12
SCN2BO60939 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN2BO60939 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SCN2BO60939 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SCN2BO60939 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms