Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 AC007292.2-201ENST00000593524 1812 ntBASIC15.21■□□□□ 0.03
PRAMEF11O60813 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.21■□□□□ 0.02
PRAMEF11O60813 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
PRAMEF11O60813 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.21■□□□□ 0.02
PRAMEF11O60813 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PRAMEF11O60813 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF11O60813 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.21■□□□□ 0.02
PRAMEF11O60813 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF11O60813 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
PRAMEF11O60813 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 AL136309.1-201ENST00000403917 691 ntBASIC15.2■□□□□ 0.02
PRAMEF11O60813 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 MIR4683-201ENST00000579659 81 ntBASIC15.2■□□□□ 0.02
PRAMEF11O60813 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 ZACNP1-201ENST00000612259 710 ntBASIC15.2■□□□□ 0.02
PRAMEF11O60813 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF11O60813 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF11O60813 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 YBX1P6-201ENST00000442962 1002 ntBASIC15.19■□□□□ 0.02
PRAMEF11O60813 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.19■□□□□ 0.02
PRAMEF11O60813 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF11O60813 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 222.4 ms