Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.29■□□□□ 0.2
EXTL3O43909 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.29■□□□□ 0.2
EXTL3O43909 AC008687.7-202ENST00000637404 953 ntBASIC16.29■□□□□ 0.2
EXTL3O43909 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
EXTL3O43909 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
EXTL3O43909 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.29■□□□□ 0.2
EXTL3O43909 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EXTL3O43909 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 AC020910.5-201ENST00000623668 1865 ntBASIC16.29■□□□□ 0.2
EXTL3O43909 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
EXTL3O43909 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.29■□□□□ 0.2
EXTL3O43909 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.28■□□□□ 0.2
EXTL3O43909 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
EXTL3O43909 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EXTL3O43909 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.28■□□□□ 0.2
EXTL3O43909 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
EXTL3O43909 AC023824.1-201ENST00000562945 2975 ntBASIC16.28■□□□□ 0.2
EXTL3O43909 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.28■□□□□ 0.2
EXTL3O43909 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.28■□□□□ 0.2
EXTL3O43909 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.28■□□□□ 0.2
EXTL3O43909 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EXTL3O43909 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EXTL3O43909 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.28■□□□□ 0.2
EXTL3O43909 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.28■□□□□ 0.2
EXTL3O43909 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.28■□□□□ 0.2
EXTL3O43909 AC131206.1-201ENST00000538078 1211 ntBASIC16.28■□□□□ 0.2
EXTL3O43909 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.28■□□□□ 0.2
EXTL3O43909 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.28■□□□□ 0.2
EXTL3O43909 MIR4525-201ENST00000580000 75 ntBASIC16.28■□□□□ 0.2
EXTL3O43909 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.28■□□□□ 0.2
EXTL3O43909 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.28■□□□□ 0.2
EXTL3O43909 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.28■□□□□ 0.2
EXTL3O43909 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.28■□□□□ 0.2
EXTL3O43909 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
EXTL3O43909 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
EXTL3O43909 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EXTL3O43909 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
EXTL3O43909 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.27■□□□□ 0.2
EXTL3O43909 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
EXTL3O43909 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.27■□□□□ 0.2
EXTL3O43909 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
EXTL3O43909 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.27■□□□□ 0.2
EXTL3O43909 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EXTL3O43909 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.27■□□□□ 0.2
EXTL3O43909 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EXTL3O43909 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.27■□□□□ 0.2
EXTL3O43909 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
EXTL3O43909 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.27■□□□□ 0.2
EXTL3O43909 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EXTL3O43909 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EXTL3O43909 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
EXTL3O43909 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.27■□□□□ 0.2
EXTL3O43909 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.27■□□□□ 0.2
EXTL3O43909 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EXTL3O43909 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.27■□□□□ 0.2
EXTL3O43909 RN7SKP175-201ENST00000408472 289 ntBASIC16.27■□□□□ 0.2
EXTL3O43909 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EXTL3O43909 COX5BP1-201ENST00000507622 393 ntBASIC16.27■□□□□ 0.2
EXTL3O43909 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.27■□□□□ 0.2
EXTL3O43909 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.27■□□□□ 0.2
EXTL3O43909 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.27■□□□□ 0.2
EXTL3O43909 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EXTL3O43909 AC023310.1-201ENST00000554836 735 ntBASIC16.27■□□□□ 0.2
EXTL3O43909 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.27■□□□□ 0.2
EXTL3O43909 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.27■□□□□ 0.2
EXTL3O43909 MIR4538-201ENST00000581377 78 ntBASIC16.27■□□□□ 0.2
EXTL3O43909 RN7SL713P-201ENST00000582127 302 ntBASIC16.27■□□□□ 0.2
EXTL3O43909 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.27■□□□□ 0.2
EXTL3O43909 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.27■□□□□ 0.2
EXTL3O43909 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.27■□□□□ 0.2
EXTL3O43909 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.27■□□□□ 0.2
EXTL3O43909 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.27■□□□□ 0.19
EXTL3O43909 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EXTL3O43909 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
EXTL3O43909 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.27■□□□□ 0.19
EXTL3O43909 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms