Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN1O15353 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN1O15353 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.91■□□□□ 0.46
FOXN1O15353 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
FOXN1O15353 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN1O15353 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
FOXN1O15353 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN1O15353 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
FOXN1O15353 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN1O15353 AP000356.3-201ENST00000382243 753 ntBASIC17.9■□□□□ 0.46
FOXN1O15353 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN1O15353 FAM8A4P-201ENST00000435433 1213 ntBASIC17.9■□□□□ 0.46
FOXN1O15353 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN1O15353 KRT18P43-201ENST00000469825 1281 ntBASIC17.9■□□□□ 0.46
FOXN1O15353 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN1O15353 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN1O15353 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN1O15353 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN1O15353 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN1O15353 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN1O15353 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN1O15353 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
FOXN1O15353 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
FOXN1O15353 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN1O15353 C18orf15-201ENST00000623680 2534 ntBASIC17.9■□□□□ 0.46
FOXN1O15353 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.46
FOXN1O15353 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.89■□□□□ 0.46
FOXN1O15353 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
FOXN1O15353 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
FOXN1O15353 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
FOXN1O15353 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
FOXN1O15353 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN1O15353 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 AC068418.2-201ENST00000577309 3703 ntBASIC17.89■□□□□ 0.45
FOXN1O15353 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.89■□□□□ 0.45
FOXN1O15353 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXN1O15353 AC073150.1-201ENST00000450406 1084 ntBASIC17.89■□□□□ 0.45
FOXN1O15353 AC100850.1-201ENST00000506768 649 ntBASIC17.89■□□□□ 0.45
FOXN1O15353 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXN1O15353 RN7SL163P-201ENST00000583100 276 ntBASIC17.89■□□□□ 0.45
FOXN1O15353 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXN1O15353 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN1O15353 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN1O15353 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.89■□□□□ 0.45
FOXN1O15353 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
FOXN1O15353 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN1O15353 MIR6858-201ENST00000620733 67 ntBASIC17.89■□□□□ 0.45
FOXN1O15353 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
FOXN1O15353 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN1O15353 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN1O15353 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
FOXN1O15353 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
FOXN1O15353 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN1O15353 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN1O15353 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms