Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PIK3C2AO00443 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PIK3C2AO00443 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PIK3C2AO00443 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PIK3C2AO00443 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PIK3C2AO00443 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
PIK3C2AO00443 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PIK3C2AO00443 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC19.58■□□□□ 0.72
PIK3C2AO00443 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.58■□□□□ 0.72
PIK3C2AO00443 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC19.58■□□□□ 0.72
PIK3C2AO00443 AL354861.1-201ENST00000445213 355 ntBASIC19.58■□□□□ 0.72
PIK3C2AO00443 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.58■□□□□ 0.72
PIK3C2AO00443 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PIK3C2AO00443 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PIK3C2AO00443 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 AGAP7P-201ENST00000582299 2062 ntBASIC19.57■□□□□ 0.72
PIK3C2AO00443 AGAP14-201ENST00000624701 2060 ntBASIC19.57■□□□□ 0.72
PIK3C2AO00443 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 LINC00634-202ENST00000505157 222 ntBASIC19.57■□□□□ 0.72
PIK3C2AO00443 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.57■□□□□ 0.72
PIK3C2AO00443 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIK3C2AO00443 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 PYY2-201ENST00000315776 282 ntBASIC19.56■□□□□ 0.72
PIK3C2AO00443 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.56■□□□□ 0.72
PIK3C2AO00443 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 RNA5SP417-201ENST00000516459 108 ntBASIC19.56■□□□□ 0.72
PIK3C2AO00443 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 DPY19L2P5-201ENST00000456300 331 ntBASIC19.56■□□□□ 0.72
PIK3C2AO00443 AC141586.1-203ENST00000567242 366 ntBASIC19.56■□□□□ 0.72
PIK3C2AO00443 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.56■□□□□ 0.72
PIK3C2AO00443 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIK3C2AO00443 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms